MCMC toolbox for Matlab - Examples

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These examples are all Matlab scripts and the web pages are generated using the publish function in Matlab. The collection of examples can be downloaded as file mcmcexamples.zip. They use the MCMC toolbox.

Monod model: Fitting two dimensional Monod model for bacterial growth.
Dose response: The classical beetle data is analysed using logistic regression and MCMC.
Algae model: Simple dynamic ode model describes a nutirition food web in a lake.
Chemical kinetics model 1: Simple chemical kinetics example with 3 model parameters.
Chemical kinetics model 2: This example uses some advanced features of the toolbox. The data is made of two batches and some of the unknowns are local to the batches.
Normal: Sample from a fixed multi dimensional Gaussian distribution to test the MCMC algorithm.
Banana: Another technical example to check that the method works also with non Gaussian target distributions